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Re: [modeller_usage] cyclic peptide modeling



Giacomo Bastianelli wrote:
I tried as you suggested, however I cannot have the
cyclic form of my protein.

That doesn't give me much information to go on, but if you send me your input files, I can take a look.

I tried also writing differently the IDs ('1' or '1:' or '1:A')..

The example I sent you works, although obviously if your C terminus is not at residue number 54, you'll have to change that. The N terminus should always be 1, unless you have done something very unusual.

	Ben Webb, Modeller Caretaker
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