[modeller_usage] loop modeling

[Mehdi Bagheri-Hamaneh <mehdi.bagheri-hamaneh AT case.edu>]

Hi all,

I am very new to loop modelling using MODELLER. I have been reading the
documentation to find the answer to my questions, but I didn't find
anything. I have two questions about loop refinement:

1) How can refine more than one loop at the same time. I know how to
model one loop, but how can I select more than one region to refine?

2) Is it a good idea to model several loops (say 10) at the same time?

Any help will be appreciated.

Yours,
Mehdi