Re: [modeller_usage] ternary complex in modweb

[Modeller Caretaker <modeller-care@ucsf.edu>]

James Fethiere wrote:
> I'm trying to generate a model of an interleukine receptor complex using 
> modweb. I have modelled separately 2 of the partners using modweb, and 
> superimposed the models on the the template in pymol.  However, modweb 
> cannot find a reliable template of the last partner (which corresponds 
> to a 4 hlx IL). I guess I can use the full ternary complex as a 
> template, but don't see how this can be done within modweb. Any idea?

To the best of my knowledge, there is no way to specify your own 
template with ModWeb - if you want to do this, you'd have to use 
Modeller directly.

	Ben Webb, Modeller Caretaker
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