Subject: Re: [modeller_usage] ternary complex in modweb
From: Modeller Caretaker <>
Date: Tue, 03 Jul 2007 10:28:56 -0700
Cc:
James Fethiere wrote:
I'm trying to generate a model of an interleukine receptor complex using
modweb. I have modelled separately 2 of the partners using modweb, and
superimposed the models on the the template in pymol. However, modweb
cannot find a reliable template of the last partner (which corresponds
to a 4 hlx IL). I guess I can use the full ternary complex as a
template, but don't see how this can be done within modweb. Any idea?
To the best of my knowledge, there is no way to specify your own
template with ModWeb - if you want to do this, you'd have to use
Modeller directly.