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Re: [modeller_usage] regrding superpose.py
- To: vidhya sankar <>
- Subject: Re: [modeller_usage] regrding superpose.py
- From: Modeller Caretaker <>
- Date: Fri, 10 Aug 2007 11:54:26 -0700
- Cc:
vidhya sankar wrote:
I have got a RMS and DRMS value of after super position 2.0482 and
1.5631 respectively.is it reliable value? .for 53.85% sequence identity
The RMS and DRMS alone are not sufficient; you must also consider the
number of equivalent positions. See
http://salilab.org/modeller/9v2/manual/node239.html
As for whether the value is "reliable", that depends on what you want to
use it for.
Ben Webb, Modeller Caretaker
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