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Re: [modeller_usage] Reg. comparing dope profile or both template and model

To: saravanan <biosaran2004@yahoo.com>
Subject: Re: [modeller_usage] Reg. comparing dope profile or both template and model
From: Modeller Caretaker <modeller-care@salilab.org>
Date: Wed, 22 Aug 2007 09:22:19 -0700
Cc: modeller_usage@salilab.org

saravanan wrote:

Thanks for the help to generate dope plot.
Now, we generated dope plot for template and model individually. How tocompare dope plots of them in a single plot?

You will only be able to do a qualitative comparison, since DOPE scoresare not normalized. You will also have to correct for any gaps in thetwo sequences.

	Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage

References:
- [modeller_usage] Reg. comparing dope profile or both template and model
  - From: saravanan <biosaran2004@yahoo.com>

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