[modeller_usage] model_comparison

[Prasenjit Mukherjee <>]

Hello Modeler users,

 

    I have a question for you. I have generated models for a sequence using one structural homologue. In one set i have used 1 crystal structure of the reference protein and generated 10 models. In the second set i have used two crystal structures of the same reference protein and generated 10 models.The sequence alignment is the same in both cases. My question is, can i compare the pdf violations of a model generated in set 1 with a model generated in set 2 ?

 

Thank you  

Prasenjit K Mukherjee

 

Graduate student

Department of Medicinal Chemistry

School of Pharmacy

University of Mississippi

 

Cell    - 662 380 0146

Office - 662 915 1286

 

 

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