Yun He wrote:
Can Modeller generate canonical alpha-helix coordinates from only a peptide sequence without any other template structure? Who can paste some sample code here? Thanks.
See http://salilab.org/modeller/wiki/Make_alpha_helix for a simple example. Ben Webb, Modeller Caretaker -- http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage