Re: [modeller_usage] fuse 3-residue peptide into a protein

[Modeller Caretaker <>]

Bingding Huang wrote:
>  I am new to Modeller. Now I want to fuse 3-residue peptide, for example 
> 3 Histine,  to  the N term of a structure-known protein like 2g2u, chain B.
> Any idea about that?

This is very similar to question #1 in the FAQ:
http://salilab.org/modeller/FAQ.html#1

If you don't have a structure for your tripeptide, you can certainly 
model it as an N-terminal insertion.

	Ben Webb, Modeller Caretaker
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