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Re: [modeller_usage] help at first script

I am a new user of modeller9v3 and I can't write the first script with which I
will search for sequences similar to the target one. I also consult the manual
of modeller6v2, will I confuse?

Why would you want to do that? Use the Modeller 9v3 manual. The 6v2 manual is out of date.

If I have understood well, the appropriate
command is sequence_search which has many options.

No, sequence_search is not the best way to do this any more. We recommend profile.build() instead. I suggest you work through the basic modeling tutorial on our website to understand how this works. But there are many ways to find templates - for example, you could do a BLAST search.

	Ben Webb, Modeller Caretaker
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage