nagaraju ngaraju wrote:
> I want to do project in homology modelling using modeller but I am
> unable to crete .pir file
> Can you suggest me in this regard
The alignment file is just a plain text file in a certain format. This
format is described at http://salilab.org/modeller/9v5/manual/node440.html
There are also plenty of examples of suitable alignment files in the
Modeller distribution (examples directory) and the online tutorial.
Ben Webb, Modeller Caretaker
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