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[modeller_usage] loop modeling based on a template
- Subject: [modeller_usage] loop modeling based on a template
- From: Marco Neves <>
- Date: Mon, 02 Mar 2009 17:46:42 +0000
I have two pdb files of the same protein in complex with different ligands.
PDB1 has all residues. PDB2 misses a small loop.
Is it possible to model the missing loop of PDB2 based on the
corresponding residues of PDB1 while keeping all other residues in the
exact same positions?
Which functions should be used?
Thank you very much!