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[modeller_usage] Modeller and DNA-protein complexes.



Dear ALL


I want to use have Modeller, DNA-protein complexes. I have a structure of a protein:DNA as a template and the sequence of an unknown dna binding protein structure
I have already made the alignement
Could modeller model the unknown protein and the unknown DNA structure? What is the good protocol to obtain a good model

Best, Denis


--
CHAIX Denis

Centre de Biochimie Structurale INSERM U554/CNRS 5048 29 rue de Navacelles F-34090 Montpellier, France Tel: 33 4 67 41 77 21 Fax: 33 4 67 41 79 13 e-mail: http://www.cbs.cnrs.fr