[modeller_usage] Loop Modeling using only part of a PDB file
Subject: [modeller_usage] Loop Modeling using only part of a PDB file
From: Robert Selwyne <>
Date: Mon, 7 Sep 2009 17:38:41 +0200
Dear Modeller Users
Residues from PHE 1223 to LEU 1245 are missing from PDB:2RFN. I want
to use ONLY the residues from 382 to 406 in my template sequence
PDB:3LCK for loop modelling. Remaining part of the residues in the
target shouldnot be disturbed.
(2RFN) Target : PHE 1223 to LEU 1245 (24 residues)
(3LCK) Template : ASP 382 to TRP 406 (24 residues)
Could you please tell me how to model this?