Hello,
I am using modeller-ligand.py script of Modeller9v6 for generation of a ligand (FE4S4 cluster ) for my modelled protein. The co-ordinates of the FE atoms and S atoms have been generated but the connect information are missing. Is there a way that somehow the ligands co-ordinates along with the connect information can be generated by the Modeller?
regards
Subarna Thakur