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Re: [modeller_usage] To add "loop restraints" or ignore the template restraints in a specific region.

To: Modeller Queries <modeller_usage@salilab.org>
Subject: Re: [modeller_usage] To add "loop restraints" or ignore the template restraints in a specific region.
From: Modeller Caretaker <modeller-care@salilab.org>
Date: Tue, 09 Feb 2010 11:43:57 -0800

On 02/09/2010 10:48 AM, Baptiste Legrand wrote:

It is possible to add helical or strand restraints but is it possible to
add loop/coil restraints?

See http://salilab.org/archives/modeller_usage/2009/msg00169.html andfollowup discussion. There is no "coil" restraint but you coulddeliberately misalign the template in this region (in which case coil isthe most likely - but not guaranteed - result).

	Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage

References:
- [modeller_usage] To add "loop restraints" or ignore the template restraints in a specific region.
  - From: Baptiste Legrand <bap.legrand@gmail.com>

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