[modeller_usage] If I disable the default N and C-term patched, must I manually apply them?
To:
Subject: [modeller_usage] If I disable the default N and C-term patched, must I manually apply them?
From: wayj86 wayj86 <>
Date: Fri, 19 Mar 2010 10:59:10 +0800
Hi all,
I hope to model a protein which is only a part of a big one (i.e. not up to its real N or C-terminal). So I turn off the default N and C patches with "patch_default=false". In this case, must I manually apply neutral patches, like ACE and CT3 to my model? I mean, can Modeller work wothout any N and C-term patches? I asked this because my next step is docking, which did not require any preexisting terminal patches. Thank you.