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Re: [modeller_usage] cyclic peptide modeling

On 1/5/11 7:43 PM, r.yu@imb.uq.edu.au wrote:

I want to use modeller to model the cyclopeptide.

...

TypeError: patch() got an unexpected keyword argument
'residue_ids'

The example you looked at must have been very old, and for Modeller 8; 
the syntax changed slightly for Modeller 9. Use the updated example in 
the Modeller wiki instead:

http://salilab.org/modeller/wiki/Cyclic%20protein

	Ben Webb, Modeller Caretaker
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