Re: [modeller_usage] Problem applying helix restraints to a homodimer model ..

[Modeller Caretaker <>]

On 1/25/11 5:10 AM, Sergio Garay wrote:
> I want to add a helix restraint to some residues in each monomer of my
> homodimer model,  I followed the example given in Modeller 9v8 Manual
> but It gives me the following error (Is it a residue numbering problem?):

Yes. Your sequence has multiple chains, so you'll need to specify the 
chain ID as well when you select residues (maybe '29:A').

> This is my alignment file, which worked well without adding the helix
> restraint:

To be sure of the numbering, look at the output PDB from that run.

	Ben Webb, Modeller Caretaker
--
             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage