On 2/9/11 4:41 AM, Dimitri Gilis wrote:
I have successfully modelled a population of tetramers. But I would like to assess them. I found that the DOPE and the GA341 scores are not suitable to assess multiple chain proteins. So, which scoring scheme can I use ?
You can certainly use DOPE and GA341, but should be aware that because only single-chain proteins were used in their construction, inter-chain interactions may not be correctly scored.
Ben Webb, Modeller Caretaker -- http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage