[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [modeller_usage] loop_refine.py parallel error



On 6/30/11 2:50 AM, 刘吉元 wrote:
> I want to run the loop_refine.py for a parallel job,so I change 
> loop_refine.py in the Tutorial example and build myloop.py in the same 
> directory,but when I run loop_refine.py,I got the error:
> "Traceback <most recent all last>:
> File "D:\modeller\loop_modeling\loop_refine.py",line 42,in <module>
> sequence='pp2a'> #code of the target
> TypeError: this constructor takes no arguments"

...
> ------------------myloop.py----------------------------------
> # Create a new class based on 'loopmodel' so that we can redefine
> # select_loop_atoms (necessary)
> class MyLoop():

You need to make MyLoop a subclass of loopmodel - compare your script
with the examples. In particular, that line should read

class MyLoop(loopmodel):

	Ben Webb, Modeller Caretaker
-- 
             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage