[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[modeller_usage] reproduction



hi,
        
        i would like to ask for a bit of an input. you see, i have an
        alignment
        of two proteins, one is an xray structure, serves as a template.
        the other one is the target.
        the template consists of a globular domain which gets reproduced
        very
        nicely, and of an extended part, which gets somehow randomized,
        or
        differs substantially from the template. 
        the question of mine is, how to inform modeller to reproduce
        this part,
        of just the whole protein which as little deviation as possible
        (ie. to
        closely resemble the template) ?
        thank you for any input,
        
        best,
        
        jean-paul