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Re: [modeller_usage] Regarding Optimal Alignment

To: Ashish Runthala <>
Subject: Re: [modeller_usage] Regarding Optimal Alignment
From: Modeller Caretaker <>
Date: Tue, 02 Aug 2011 08:25:11 -0700
Cc: modeller <>

On 8/2/11 12:06 AM, Ashish Runthala wrote:

Will somebody guide me how to incorporate the distant conserved chunk
ENLYFQSM from "2GS3A" template without making the shifted alignments
just to satisfy this constraint.


Sure, just add gaps to your target sequence.

	Ben Webb, Modeller Caretaker
--
             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage

References:
- [modeller_usage] Regarding Optimal Alignment
  - From: Ashish Runthala <>

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