Re: [modeller_usage] Template PDB files

[Modeller Caretaker <>]

On 8/7/12 5:08 AM, Nanda Pandey wrote:
> I am very new to modeller so a small query, Please let me know how do I
> compare the template sequences using compare script. Do I need to
> download individual template files from PDB

Yes, you will need to download template PDB files.

> Also, whta should be done in case I have too many template
> sequences with same e -value (e.g. 0 e -value) should i download all of
> them??

You can if you like - how you choose which template(s) to use for 
modeling is up to you.

	Ben Webb, Modeller Caretaker
--
             http://www.salilab.org/modeller/
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