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[modeller_usage] moldpdf, DOPE score and GA341 score
To : modeller_usageATsalilab.org
Subject : [modeller_usage] moldpdf, DOPE score and GA341 score
From : Ahmet yıldırım <ahmedo047ATgmail.com >
Date : Wed, 23 Jan 2013 15:00:53 +0200
Dear users, I am a new user of Modeller. I have the following results: >> Summary of successfully produced models:
Filename molpdf DOPE score GA341 score
----------------------------------------------------------------------
qseq1.B99990001.pdb 8602.63281 -113144.73438 1.00000
qseq1.B99990002.pdb 8773.10840 -113346.03125 1.00000
qseq1.B99990003.pdb 8349.71387 -112852.75000 1.00000
qseq1.B99990004.pdb 9365.16406 -111568.75781 1.00000
qseq1.B99990005.pdb 8553.98926 -112664.98438 1.00000
1.) What is "moldpdf", "DOPE score" and "GA341 score"? What is the meaning of them?
2.) how will I determine the best result according to the above table /results? What is the best result?
Thanks in advance -- Ahmet Yıldırım