Modeller_Usage Mailing List (by thread)
- [modeller_usage] Modeller error, 631E,
si yang
- [modeller_usage] Syntax errors in defining model atoms,
doranhen
- [modeller_usage] how to get pdb_95.bin file,
BALA SUBRAMANI G L
- [modeller_usage] Inserting Chain ID Into Model,
David Johnson
- [modeller_usage] modeling with water, HETATM,
Krupal Jethava
- [modeller_usage] membrane protein,
sdimicco
- [modeller_usage] filtering membrane proteins,
sdimicco
- [modeller_usage] moldpdf, DOPE score and GA341 score,
Ahmet yıldırım
- [modeller_usage] Searching the PDB for similar structures,
nornik
- [modeller_usage] leave out termini of a structure,
Ahmet yıldırım
- [modeller_usage] Minimize structure energy,
danashah
- [modeller_usage] How NOT to add missing residues,
Anirban
- [modeller_usage] Reading in a model with multiple chains?,
Patrice Peterson
- Re: [modeller_usage] no_subject...,
DANIEL TAYLOR
- [modeller_usage] Advice on best template for Modelling,
KEVIN KARIUKI WAMAE
- [modeller_usage] Suggested answer to Question 3,
jssnk
- [modeller_usage] automatic alignment pdb file with gap to the similar complete sequence,
THUREAU Aurelien
- [modeller_usage] Open spline error,
Ignacio Ibarra
- [modeller_usage] building missing residues,
Mary Varughese
- [modeller_usage] Modelling ofsymetric dimer,
James Starlight
- [modeller_usage] Fwd: Run Modeller processes on multiple cpus,
Lalith Kumar
- [modeller_usage] How to get specified residue modelling,
Anogna
- [modeller_usage] how to build the loop of protein model using modeller,
aixintiankong
- [modeller_usage] change restraints relative weights,
Pietro Sormanni
- [modeller_usage] Error with the Mutate script,
Arjun Ray
- Re: [modeller_usage] modeller_usage Digest, Vol 12, Issue 17,
aixintiankong
- [modeller_usage] Fwd: Customised Modeling - Template is NMR Structure,
Priya Chaudhary
- [modeller_usage] Select and remove atoms from automodel,
Ignacio Ibarra
- [modeller_usage] Evaluating models with procheck,
HERBERT MAX VENTHUR PE¥A
- [modeller_usage] HETATM modelling query -reg,
venkatesh s
- [modeller_usage] Residues missing !!! How to specify NMR MODEL - 2,
Priya Chaudhary
- [modeller_usage] Urgent Query . Please do reply. Thanks a ton.,
Priya Chaudhary
- [modeller_usage] Doubt Regarding multiple X, Y, Z coordinates for same atoms,
Priya Chaudhary
- [modeller_usage] Amount of models,
HERBERT MAX VENTHUR PE¥A
- [modeller_usage] Question about huge gaps,
Daron Standley
- [modeller_usage] Mutate script crashing,
Arjun Ray
- [modeller_usage] MISSING RESIDUES IN TEMPLATE.,
Priya Chaudhary
- [modeller_usage] Out-of-range coordinates,
Arjun Ray
- [modeller_usage] constant starting molecule for models,
Dermot Mallon
- [modeller_usage] Modeller 9.12 release,
Modeller Caretaker
- [modeller_usage] MUTATE_MODEL.py QUERIES....,
Priya Chaudhary
- [modeller_usage] Model of the GFP,
James Starlight
- [modeller_usage] Missing atoms,
Francesco Pietra
- [modeller_usage] Long loop omitting,
Ramin Ekhteiari
- [modeller_usage] Denovo loop remodeling,
Ramin Ekhteiari
- [modeller_usage] headache with alignment,
Francesco Pietra
- [modeller_usage] automodel/Mymodel,
Ramin Ekhteiari
- [modeller_usage] SOLVED headache with alignment,
Francesco Pietra
[modeller_usage] multiple templates alignment with target,
Ramin Ekhteiari
[modeller_usage] Preserving orientation of structure,
Thomas Albers
[modeller_usage] making ideal alpha-helix,
Jan Kosinski
[modeller_usage] Modeling Ligand from non-homologous protein,
Rohitesh Gupta
[modeller_usage] Ligand Introduction from non-homologous protein,
Rohitesh Gupta
[modeller_usage] Build missing residues for multisubunit protein,
Kelly Tran
[modeller_usage] Make non-adjacent mutations, preserve backbone and avoid clashes,
David Johnson
[modeller_usage] Mutate_model.py :How to specify model number , if the PDB is NMR structure ?,
Priya Chaudhary
[modeller_usage] Interpretation of family.mat automated template selection,
Jurgens de Bruin
[modeller_usage] query related to modelling with ligand using multiple templlate,
Rajesh gazara
[modeller_usage] mutate model syntax error,
Daffodil Canson
[modeller_usage] additional restraints in Modeller,
fantasticqhl
[modeller_usage] modelling with multiple templates,
HIDDEN
[modeller_usage] Loop refining,
HERBERT MAX VENTHUR PE¥A
[modeller_usage] Workshop on Theoretical Model Archiving, Validation and PDBx/mmCIF Data Exchange Format” on October 21 & 22, 2013 at Rutgers University, NJ.,
Torsten Schwede
[modeller_usage] trans proline,
Tomek Wlodarski
[modeller_usage] modelling a protein with hetero-atoms,
pr@tibh@
[modeller_usage] construct a model with a ligand,
fantasticqhl
Re: [modeller_usage] modeller_usage Digest, Vol 12, Issue 55,
Rajesh gazara
[modeller_usage] Modelling with Side chain Restraints,
Lalith Kumar
[modeller_usage] problem in using mutate_model.py,
Anna Marabotti
[modeller_usage] constraints failed,
fantasticqhl
[modeller_usage] extended conformations,
fantasticqhl
[modeller_usage] channel-like structure,
fantasticqhl
[modeller_usage] Problem importing modeller and _modeller modules,
Gustavo Machado Alvares de Lima
[modeller_usage] Fwd: Installation Issues,
Amjad Farooq
[modeller_usage] Fwd: [ModPipe-users] Installation Issues,
Amjad Farooq
[modeller_usage] Scattered homology model based on multiple temlpates,
Lalith Kumar
[modeller_usage] cryo-EM maps,
Leonardo Herrera
[modeller_usage] missing sc atoms and rotamers,
micheal j twin
[modeller_usage] Extract Chain ID,
Amjad Farooq
[modeller_usage] Check out my profile on LinkedIn,
Sako Mirzaie
[modeller_usage] Protein specified in ALIGN_CODES<i> was not found in the alignment file; ALIGN_CODES< 1> = 1N11,
listek_wfrp
[modeller_usage] Hardware?,
Istvan Jonyer
[modeller_usage] homology modelling,
pr@tibh@
[modeller_usage] multiple templates - loop modelling,
Simone Fulle
[modeller_usage] questions about multichains modeller,
Yi Kong
[modeller_usage] help regarding some problems related to modelling,
DHWANI DHOLAKIA
[modeller_usage] How to improve sequence alignment?!,
Amjad Farooq
[modeller_usage] Multiple models for a single template,
vigneshwari subramanian
[modeller_usage] mutate_model on protein with ligand,
Anna Marabotti
[modeller_usage] "No module named modeller",
Cecilia Lindgren
[modeller_usage] Question to the align2d_mult.py file,
Simone Fulle
[modeller_usage] Allhmodel chirality inversion,
gbanoczi
[modeller_usage] TypeError: restraint_group should be a physical_type object,
Isaure Chauvot de Beauchene
[modeller_usage] Replacing cysteine with homocysteine,
Arjun Ray
[modeller_usage] DOPE for multiple template-based homology modeling,
HERBERT MAX VENTHUR PE¥A
[modeller_usage] Exclude residues from modeling,
Jurgens de Bruin
[modeller_usage] Energy minimization,
Dermot Mallon
[modeller_usage] (no subject),
Dermot Mallon
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