On 2/15/13 5:20 PM, Patrice Peterson wrote:
I know I can use the model_segment argument to complete_pdb() or model.read() to select a range of residues when loading a model, but is there a way to read in a *non-contiguous* range of amino acids, as in my example?
No, sorry - there is no way to do that currently. You would have to edit your PDB files, or read in a contiguous range and align the residues you don't want to use for modeling with gaps in the target.
Ben Webb, Modeller Caretaker -- modeller-care@salilab.org http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage