On 1/16/14 10:07 AM, James Starlight wrote:
I wounder to know if it possible to add to my resulted chimeric protein some missed residues (commonly in N, C termi and loops regions) which are absent in both templates .
Sure, that's straightforward; you basically build a model of the whole sequence using the partial sequence as your template. See http://salilab.org/modeller/wiki/Missing%20residues for an example.
Ben Webb, Modeller Caretaker -- modeller-care@salilab.org http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage