Modeller_Usage Mailing List (by thread)
- Re: [modeller_usage] Exclude residues from modeling,
Modeller Caretaker
- Re: [modeller_usage] (no subject),
Modeller Caretaker
- [modeller_usage] Reg modeller,
Manjula Mummadisetti
- [modeller_usage] Loop optimization starting from a structure with ligand,
ms
- [modeller_usage] Missed residues,
James Starlight
- [modeller_usage] Refinement step questions,
gbanoczi
- Re: [modeller_usage] problem in generating models,
Nupur Bansal
- [modeller_usage] model.patch,
Roland Rivera
- [modeller_usage] Using 2 templates, one to just model the protein and the other to just model the ligand,
Juan Munoz-Garcia
- [modeller_usage] Best workflow to modeling a disordered loop in a complicated structure,
Zachary W Carpenter
- [modeller_usage] Reading heteroatoms,
Lucas
- [modeller_usage] Modeller 9.13 release,
Modeller Caretaker
- [modeller_usage] Run Modeller on multiple cpu,
Lalith Kumar
- [modeller_usage] Alignment missing,
Paul Zair Leyva Miranda
- Re: [modeller_usage] Select and remove atoms from automodel,
Ignacio Ibarra
- [modeller_usage] Use some local alignments,
fakharian
- [modeller_usage] How to override the build_seq() command in loopmodel class,
Abhijit Muley
- [modeller_usage] Modeller Parallel work,
Yao, Jianzhuang
- [modeller_usage] PYTHONPATH on Windows 7,
chris.wood
- [modeller_usage] Question,
Francisco garcia
- [modeller_usage] Changing dir and printing hydrogens,
Manoj Singh
- [modeller_usage] loop missing in a crystal structure,
flavio seixas
- [modeller_usage] Multiple sequence alignment + modeling in one script,
James Starlight
- [modeller_usage] Including ligand from template,
James Starlight
- Re: [modeller_usage] Including ligand from template,
Modeller Caretaker
Re: [modeller_usage] modeller_usage Digest, Vol 13, Issue 23,
Rajesh gazara
[modeller_usage] Blast search for structures related to target,
James Starlight
[modeller_usage] Loop refining,
James Starlight
[modeller_usage] Modeling muli-chain protein,
Richard W. Harper
[modeller_usage] leonardo david herrera invited you to check out Dropbox,
Dropbox
[modeller_usage] GPCRs and iterative modeling,
James Starlight
[modeller_usage] Generate PDB using diheral angles,
Harinder Singh
Re: [modeller_usage] How do you use MOULDER?,
meginir urestal
[modeller_usage] Alternate sidechain positions,
meginir urestal
[modeller_usage] Should you use multiple pdb files of the same sequence when available for multiple template homology modeling?,
meginir urestal
[modeller_usage] Hydrogen Atom Preservation,
Alexander Parella
[modeller_usage] Loop refirement using simulated annealing,
James Starlight
[modeller_usage] Modelling a circular permutated chimera,
James Starlight
[modeller_usage] Reading density files,
chris.wood
[modeller_usage] Heme out in space,
Joel Tyndall
[modeller_usage] 'environ' is not defined error,
Sajeewa Pemasinghe
[modeller_usage] Structuropedia,
Amjad Farooq
[modeller_usage] Mismatch in the alignment,
Sajeewa Pemasinghe
[modeller_usage] conjugate gradients or molecular dynamics optimizations with automodel.make(),
Li SUN
[modeller_usage] Protein:Protein complex PIR format,
Parker de Waal
[modeller_usage] Problem regarding 3D structure prediction,
Vishal Nemaysh
[modeller_usage] Join me on LinkedIn to share updates and stay in touch,
Jayashankar Selvadurai
[modeller_usage] Advanced clustering,
James Starlight
[modeller_usage] Modeller 9.14 release,
Modeller Caretaker
[modeller_usage] Auto Response,
Filipe Natalio
[modeller_usage] User restriction,
flavio seixas
[modeller_usage] distance restraint,
flavio seixas
[modeller_usage] secondary structure restrain error,
Albert
[modeller_usage] malign3d error with different structures but the same sequence,
Felipe Villanelo
[modeller_usage] Models based on the multiple templates,
James Starlight
[modeller_usage] using an external multiple sequence alignment,
ashika torikora
[modeller_usage] renumbering residues,
Jan Kosinski
[modeller_usage] problem with the separate homo-trimer antiparallel beta sheet,
Namita Dube
[modeller_usage] Adding missing residues to PDB with two chains,
Anjela Manandhar
[modeller_usage] build_profile problem,
Vinicius Seus
[modeller_usage] Modeller for alignment and modeling,
Michael Meyer
[modeller_usage] modeller parallel,
Yixin Ai
[modeller_usage] selection of loop,
Yixin Ai
[modeller_usage] Newbie question - Selecting chains and plotting DOPE profiles,
Justin Havird
[modeller_usage] Compatability with Anaconda,
R. Michael Sivley
[modeller_usage] Physical.values,
chris.wood
[modeller_usage] Modelling loop region in homodimer,
aneesh cna
[modeller_usage] alpha-helix,
Juan Munoz-Garcia
[modeller_usage] Using unpublished structures for template to create models?,
Geoffrey Lippa
Re: [modeller_usage] Disulfide bridge between residues into different monomers,
bharat lal
[modeller_usage] Error,
Sakshi Rajput
[modeller_usage] using Modeller for building models using contacts and secondary structures,
Adhikari, Badri (MU-Student)
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