On 02/05/2014 10:57 AM, Manjula Mummadisetti wrote:
I would like to understand the link below. I am not quite sure what each
of those numbers mean, although the link does mention, can somebody
clearly explain what those numbers are in restraints panel?
http://salilab.org/modeller/8v1/manual/node157.html#SECTION:atomid
All the numbers are explained at that link. However, we don't generally
recommend you add restraints by hand-writing raw restraints files; you
can do it from Python instead. There is an example at
http://salilab.org/modeller/9.12/manual/node27.html
Also, I would like to restrain N-N distance rather than C-alpha C-alpha.
How do I make those changes?