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[modeller_usage] Modeller 9.13 release



The new version of Modeller, 9.13, is now available for download! Please see the download page at http://salilab.org/modeller/ for more information.

If you have a license key for Modeller 8 or 9, there is no need to reregister for Modeller 9.13 - the same license key will work. (It won't do any harm to reregister if you want to, though!)

9.13 is primarily a bugfix release relative to the last public release
(9.12). Major user-visible changes include:

# Modeller now includes a variety of SOAP (statistically optimized
  atomic potential) scores for assessing proteins, loops, and
  interfaces.

# The Lennard-Jones interaction energy is now artificially truncated at
  very short distance; this makes simulations with poor starting
  conditions much less likely to 'blow up'.

# model.get_insertions(), model.get_deletions() and model.loops() now
  have an include_termini option; if False, residue ranges that include
  chain termini are excluded from the output.

See the Modeller manual for a full change log:
http://salilab.org/modeller/9.13/manual/node39.html

If you encounter bugs in Modeller 9.13, please see
http://salilab.org/modeller/9.13/manual/node10.html for information on
how to report them.

Note: you are receiving this email either because you subscribed to the modeller_usage mailing list, or you provided this address when you requested a Modeller license and you ticked the "notify me of new releases" box. In the latter case, if you no longer wish to receive announcements of new Modeller releases, simply reply to this email and let us know.

	Ben Webb, Modeller Caretaker
--
             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage