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Re: [modeller_usage] Including ligand from template

On 4/15/14, 11:40 PM, James Starlight wrote:

1)  what should I provide to the below ali.py script to copy HETATM from
the template to the model

This is done in the alignment file.


2) how  salt bridges can be defined in the model  taken  from the
template with the homology cysteins in the same positions?

http://salilab.org/modeller/9.13/manual/node24.html

	Ben Webb, Modeller Caretaker
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