Re: [modeller_usage] Including ligand from template

[Modeller Caretaker <>]

On 4/15/14, 11:40 PM, James Starlight wrote:
> 1)  what should I provide to the below ali.py script to copy HETATM from
> the template to the model

This is done in the alignment file.

> 2) how  salt bridges can be defined in the model  taken  from the
> template with the homology cysteins in the same positions?

http://salilab.org/modeller/9.13/manual/node24.html

	Ben Webb, Modeller Caretaker
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