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Re: [modeller_usage] malign3d error with different structures but the same sequence

On 8/21/14, 3:36 PM, Felipe Villanelo wrote:

_modeller.ModellerError: fit2xyz_296E> Number of equivalent positions <
3:        0

I search this error, and most of the time is related to too different
proteins that do not align well in sequence.
Close - it means that they do align well *structurally*. Of course, if they don't align well in sequence they're probably not going to align structurally either, but that's not always the case. Are your structures very different (structurally)? 

	Ben Webb, Modeller Caretaker
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