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[modeller_usage] default optimization and refinement protocol



Hello. I would like to know the parameters of the default optimization
and refinement protocol?. I mean, for a.library_schedule is
autosched.normal and a.repeat_optimization=1, but for
a.max_var_iterations, a.md_level, a.max_molpdf, what parameters are
used?

When the template has high sequence identity with the target, what
would be the recommended level of optimization and refinement?

Thanks.