Dears,
I modeled two protein domains structure based on comparative modelling by
using MODELLER. I want to link or combine them into one dimer protein based on
available template. I need you experiences in in this case since I
stuck here. I am awaiting your proposed procedure and MODELLER
script. Further informations, I have:
1. two different protein domains
(NBD and TMD). I got them based on comparative modelling with two different
protein templates.
2. Two chain template for symmetry
interface with of NBD and TMD as it mentioned in literature it used for
this purpose, but they mentioned they used MODELLER in this task without
procedure details.
My question is to link these two
modeled domain into one model and make it homodimer based on that template
using modeller ?
Thank you
Maytham