Re: [modeller_usage] restrains.make_distance function

[Modeller Caretaker <modeller-care@salilab.org>]

On 2/27/20 6:39 AM, Mariana GONZALEZ MEDINA wrote:
> I am trying to obtain the stereochemical restraints between Calphas in 
> two of my templates. However, I am not sure how to set the parameter 
> maximal_distance.
> How do I chose the right distance to set the maximal distance between 
> Calphas that I need to use to obtain the distance restraints?
Normally you would not need to call make_distance() directly. automodel 
will do this automatically for you (for CA-CA distances it uses 14.0 
angstroms by default, see max_ca_ca_distance in 
modlib/modeller/automodel/automodel.py). What is it you're trying to do?
	Ben Webb, Modeller Caretaker
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