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Re: [modeller_usage] Script to rank models by DOPE score

To: "Franceschini Ghilardi, Amanda (BIDMC - Lijun Sun - General Surg SF)" <>, "" <>
Subject: Re: [modeller_usage] Script to rank models by DOPE score
From: Modeller Caretaker <>
Date: Wed, 7 Sep 2022 09:39:34 -0700
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On 9/7/22 9:26 AM, Franceschini Ghilardi, Amanda (BIDMC - Lijun Sun - >I generated 100 models of a protein and now I would like to select the

20 with the lowest DOPE score. I tried to use the script provided in themanual but it gave an error (see below).

You have introduced an error in the script compared to that in themanual; see https://salilab.org/modeller/10.3/manual/node31.html

ok_models = [x for x in a.outputs if x['failure'] is None


This is not valid Python syntax.

	Ben Webb, Modeller Caretaker
--
             https://salilab.org/modeller/
Modeller mail list: https://salilab.org/mailman/listinfo/modeller_usage

References:
- [modeller_usage] Script to rank models by DOPE score
  - From: "Franceschini Ghilardi, Amanda (BIDMC - Lijun Sun - General Surg SF)" <>

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