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Contents
- #EPSF
- #EPSF produce
| #EPSF produce
- A4_WINDOW_MARGIN
- WORLD define
- ADD_BONDS
- MAKE_BONDS make
- ADD_DATA[1]
- READ_TABLE read
- ADD_DATA[2]
- READ_TABLE read
- ARGUMENTS
- Predefined TOP variables
- ARROW
- ARROW draw
- ARROW_SHAPE
- ARROW draw
- ATOM_COLOR
- SELECT_ATOMS select
- ATOM_LINE
- SELECT_ATOMS select
- ATOM_TYPE
- SELECT_ATOMS select
- AXES2D
- AXES2D draw
| CAPTION place
| CAPTION place
| RESET_CAPTIONS reset
| TRANSFORM transform
- AXIS
- ROTATE_MOL_AXIS rotate
- AXIS2D
- AXES2D draw
- BALL_STICK
- WORLD define
| SELECT_ATOMS select
| BALL_STICK draw
- BAR_DX
- GET_BARS calculate
| GET_BARS calculate
| GET_DENSITY calculate
- BAR_DY
- GET_DENSITY calculate
- BAR_GRAYNESS
- HIST2D draw
- BAR_LEGEND
- DPLOT draw
- BAR_LEGEND_PLACES
- DPLOT draw
- BAR_LINE_TYPE
- HIST2D draw
- BAR_WIDTH
- SPECTRUM draw
| HIST2D draw
| HIST2D draw
- BAR_XSHIFT
- SPECTRUM draw
| HIST2D draw
- BLACK
- PLOT2D draw
- BOND_COLOR
- MAKE_BONDS make
- BOND_LINE
- MAKE_BONDS make
| MAKE_BONDS make
- BOND_TAPER
- MAKE_BONDS make
- BOND_WIDTH_FACTOR
- MAKE_BONDS make
- CALL
- CALL call
- CAPTION
- AXES2D draw
| CAPTION place
| CAPTION place
| CAPTION place
| PRINT print
- CAPTION CAPTION_POSITION = 4 or 5
- AXES2D draw
- CAPTION_POSITION
- LEGEND draw
- CAPTION_TEXT
- READ_TABLE read
- CAPTION_XLEFT
- AXES2D draw
| CAPTION place
| CAPTION place
| CAPTION place
- CAPTION_XRIGHT
- AXES2D draw
| CAPTION place
- CENTER_MOL
- CENTER_MOL center
- CLIP
- LINE2D draw
- CLOSE
- CLOSE close
- COLOR_COLUMN
- PLOT2D draw
- COLOR_RANGE
- PLOT2D draw
- COLOR_STYLE
- PLOT2D draw
- COMMAND
- Predefined TOP variables
- COORDINATES
- PRINT print
| PRINT print
| ARROW draw
| ARROW draw
- COVALENT_BOND
- MAKE_BONDS make
- DEFAULT_ATOM_COLOR
- DEFAULT_ATOM_COLOR color
- DEFINE_INTEGER
- DEFINE_INTEGER define
- DEFINE_LOGICAL
- DEFINE_LOGICAL define
- DEFINE_REAL
- DEFINE_REAL define
- DEFINE_STRING
- DEFINE_STRING define
- DEGREES
- ROTATE_MOL_AXIS rotate
- DENSITY_TO_XY
- DENSITY_TO_XY Density
- DESCRIPTION
- LEGEND draw
- DIRECTORY
- SET set
| Predefined TOP variables
- DO
- TOP Commands
| DO DO
| DO DO
- DPLOT
- READ_DPLOT read
| DPLOT draw
- DPLOT_BOUNDS
- DPLOT draw
| DPLOT draw
- DPLOT_COLUMN
- READ_DPLOT read
- DPLOT_FILL
- READ_DPLOT read
- DPLOT_FORMAT
- READ_DPLOT read
| READ_DPLOT read
| WRITE_DPLOT write
| WRITE_DPLOT write
- DPLOT_GRAYNESS
- DPLOT draw
| DPLOT draw
| DPLOT draw
| DPLOT draw
- DPLOT_LINE_TYPE
- DPLOT draw
- DPLOT_ORIENTATION
- READ_DPLOT read
| WRITE_DPLOT write
| SHUFFLE_DPLOT re-organize
- DPLOT_PART
- DPLOT draw
- DPLOT_STYLE
- DPLOT draw
- DPLOT_SYMMETRIZE
- READ_DPLOT read
- ELSE
- IF conditional
| STRING_IF conditional
| Predefined TOP variables
- END_DO
- TOP Commands
| DO DO
- END_SUBROUTINE
- TOP Commands
| SUBROUTINE define
| END_SUBROUTINE end
- ERROR_COLUMN
- PLOT_ERROR_BARS draw
| FIT non-linear
- ERROR_SIGN
- PLOT_ERROR_BARS draw
| PLOT_ERROR_BARS draw
- ERROR_STATUS
- Predefined TOP variables
- EXPONENT
- AXES2D draw
| AXES2D draw
- EYE_TO_SCR
- WORLD define
- FILE
- Predefined TOP variables
- FILE_ACCESS
- OPEN open
| Predefined TOP variables
- FILE_EXISTS
- INQUIRE check
| Predefined TOP variables
- FILE_EXT
- SET set
| SET set
| Predefined TOP variables
- FILE_ID
- SET set
| SET set
| SET set
| SET set
| SET set
| Predefined TOP variables
- FILE_STATUS
- OPEN open
| Predefined TOP variables
- FIT
- FIT non-linear
| FIT2 non-linear
| FIT2 non-linear
- FIT2
- FIT2 non-linear
- FIT_CUTOFFS
- FIT non-linear
- FIT_MODEL
- FIT non-linear
- FIT_PARAM_INDICES
- FIT non-linear
- FIT_PARAM_INITIAL
- FIT non-linear
- FIT_WORLD
- FIT non-linear
| FIT non-linear
- FOR
- SELECT_ATOMS select
| SELECT_ATOMS select
- FROM
- SELECT_ATOMS select
| SELECT_ATOMS select
- GET_BARS
- GET_BARS calculate
- GET_DENSITY
- GET_DENSITY calculate
- GO_TO
- TOP Commands
| GO_TO jump
| LABEL place
| IF conditional
| STRING_IF conditional
- HALF_WINDOW
- SMOOTH_TABLE smooth
- HIST2D
- HIST2D draw
- ID1
- SET set
| SET set
| SET set
| Predefined TOP variables
- ID2
- SET set
| SET set
| SET set
| Predefined TOP variables
- IF
- INQUIRE check
| IF conditional
- INCLUDE
- INCLUDE include
| INCLUDE include
- INCLUDE_FILE
- INCLUDE include
| Predefined TOP variables
- INQUIRE
- INQUIRE check
- IO_UNIT
- READ read
| Predefined TOP variables
- LABEL
- TOP Commands
| GO_TO jump
| LABEL place
- LABEL_ATOMS
- LABEL_ATOMS label
| SELECT_ATOMS select
- LABEL_COLUMN
- PLOT2D draw
- LABEL_FONT
- PLOT2D draw
- LABEL_LOCATION
- PLOT2D draw
- LEGEND
- LEGEND draw
| LEGEND draw
| LEGEND draw
- LEGEND_POSITION
- LEGEND draw
- LINE2D
- LINE2D draw
- LINE2D_LINE_TYPE
- LINE2D draw
- LINE2D_WIDTH
- LINE2D draw
- LINE2D_WIDTH_SCALING
- LINE2D draw
- LINE_GRAYNESS
- LINE2D draw
- MAKE_BONDS
- MAKE_BONDS make
| SELECT_ATOMS select
- NEW_PAGE
- NEW_PAGE start
- NO_SPLINE_POINTS
- FIT non-linear
| SMOOTH_TABLE smooth
- NO_XY_SCOLUMNS
- WRITE_TABLE write
| WORLD define
| WORLD define
| WORLD define
| HIST2D draw
| HIST2D draw
| TRANSFORM transform
| SMOOTH_TABLE smooth
- NO_XY_SCOLUMNS(1)
- WORLD define
| HIST2D draw
- NO_XY_SCOLUMNS(2)
- WORLD define
| HIST2D draw
- NUMBER_DENSITY_PLOT
- DPLOT draw
| DPLOT draw
| DPLOT draw
- NUMBER_PLACES
- DPLOT draw
| TOP Commands
| TOP Commands
| WRITE write
| Predefined TOP variables
- OBJECTS
- WRITE write
| Predefined TOP variables
- OBJECTS_FILE
- Predefined TOP variables
- OPEN
- OPEN open
- OPERATE
- OPERATE perform
- OPERATION
- Predefined TOP variables
- OUTPUT_CONTROL
- Predefined TOP variables
- OUTPUT_DIRECTORY
- Predefined TOP variables
- PAPER_WINDOW
- WORLD define
| WORLD define
| WORLD define
| WORLD define
- PERSPECTIVE
- WORLD define
- PLOT2D
- READ_TABLE read
| PLOT2D draw
| PLOT_ERROR_BARS draw
- PLOT2D_LINE_TYPE
- PLOT2D draw
| SPECTRUM draw
| PLOT_ERROR_BARS draw
- PLOT2D_SYMBOL_TYPE
- PLOT2D draw
| PLOT2D draw
| PLOT_ERROR_BARS draw
| PLOT_ERROR_BARS draw
- PLOT_ERROR_BARS
- PLOT_ERROR_BARS draw
- PLOT_POINTS
- SMOOTH_TABLE smooth
| SMOOTH_TABLE smooth
- POINT_FONT
- PLOT2D draw
| DPLOT draw
| PLOT_ERROR_BARS draw
- POINT_MODULUS
- READ_TABLE read
- POSITION
- WORLD define
- POSTSCRIPT
- POSTSCRIPT write
- POSTSCRIPT_TEXT
- POSTSCRIPT write
- PRINT
- PRINT print
- PRINT_ANGLE
- PRINT print
- PRINT_DXY
- DPLOT draw
| PRINT print
- PRINT_FONT
- DPLOT draw
- PRINT_HORIZ
- PRINT print
- PRINT_MODE
- PRINT print
| PRINT print
- PRINT_POINT
- PRINT print
- PRINT_VERT
- PRINT print
- PRINT_XY
- PRINT print
- RADIUS
- SELECT_ATOMS select
| SELECT_ATOMS select
- RADIUS_FACTOR
- SELECT_ATOMS select
- READ
- READ read
- READ_DPLOT
- READ_DPLOT read
| WORLD define
| WORLD define
| DPLOT draw
| SHUFFLE_DPLOT re-organize
- READ_PDB
- WORLD define
| WORLD define
| READ_PDB read
- READ_TABLE
- READ_TABLE read
| WORLD define
| WORLD define
- RECORD
- SET_RECORD sets
| SET_RECORD sets
| READ read
| Predefined TOP variables
- RES_TYPE
- SELECT_ATOMS select
- RESET
- WORLD define
| RESET reset
| RESET reset
| RESET reset
- RESET_CAPTIONS
- RESET_CAPTIONS reset
- RESET_LEGEND
- LEGEND draw
| RESET_LEGEND reset
- RESULT
- OPERATE perform
| STRING_OPERATE perform
| Predefined TOP variables
- RETURN
- RETURN return
| END_SUBROUTINE end
| END_SUBROUTINE end
- ROOT_NAME
- SET set
| SET set
| Predefined TOP variables
- ROTATE_MOL
- ROTATE_MOL rotate
- ROTATE_MOL_AXIS
- ROTATE_MOL_AXIS rotate
- ROUTINE
- CALL call
| Predefined TOP variables
- ROW_RANGE
- READ_TABLE read
| READ_TABLE read
- SCR_TO_TOP
- WORLD define
- SEARCH_STRING
- SELECT_ATOMS select
- SEGMENT_RANGE
- SELECT_ATOMS select
- SELECT_ATOMS
- DEFAULT_ATOM_COLOR color
| SELECT_ATOMS select
- SELECT_DATA
- SET_RECORD sets
| SELECT_DATA select
- SELECTION_MODE
- SELECT_ATOMS select
- SELECTION_STATUS
- SELECT_ATOMS select
- SELECTION_STEP
- SELECT_ATOMS select
- SET
- WORLD define
| SET set
- SET STAMP_TEXT
- SET STAMP_TEXT
- SET_RECORD
- SET_RECORD sets
- SHIFT
- TRANSLATE_MOL translate
- SHUFFLE_DPLOT
- SHUFFLE_DPLOT re-organize
- SLAB
- SELECT_ATOMS select
| SELECT_ATOMS select
- SMOOTH_TABLE
- SMOOTH_TABLE smooth
- SMOOTH_TYPE
- SMOOTH_TABLE smooth
- SPECTRUM
- SPECTRUM draw
- SPHERE_CENTER
- SELECT_ATOMS select
| SELECT_ATOMS select
- SPHERE_RADIUS
- SELECT_ATOMS select
- STOP
- TOP Commands
| STOP exit
- STOP_ON_ERROR
- Predefined TOP variables
- STRING_ARGUMENTS
- Predefined TOP variables
- STRING_IF
- STRING_IF conditional
- STRING_OPERATE
- STRING_OPERATE perform
- SUBROUTINE
- SUBROUTINE define
- SWITCH_PS
- SWITCH_PS open
- SYMBOL
- LEGEND draw
- SYSTEM
- SYSTEM execute
- THEN
- IF conditional
| STRING_IF conditional
| Predefined TOP variables
- TICK_FONT
- AXES2D draw
- TRANSFORM
- TRANSFORM transform
- TRANSLATE_MOL
- TRANSLATE_MOL translate
- TRF_PARAMETERS
- TRANSFORM transform
- TRF_TYPE
- TRANSFORM transform
- TRF_UNDEFINED
- TRANSFORM transform
- VARIABLES
- Predefined TOP variables
- WORLD
- WRITE_TABLE write
| WORLD define
| WORLD define
| SPECTRUM draw
| RESET_CAPTIONS reset
| TRANSFORM transform
- WORLD_FRACTION
- WORLD define
- WORLD_WINDOW
- WORLD define
| WORLD define
| WORLD define
| GET_BARS calculate
| GET_DENSITY calculate
| FIT non-linear
| FIT non-linear
- WRITE
- WRITE write
- WRITE_DPLOT
- WRITE_DPLOT write
- WRITE_PDB
- WRITE_PDB write
- WRITE_TABLE
- WRITE_TABLE write
- WRITE_TOP
- WRITE_TOP write
- X_AXIS_FACTOR
- AXES2D draw
- X_LABEL_SHIFT
- AXES2D draw
- X_LABEL_STYLE
- AXES2D draw
- X_TICK
- AXES2D draw
| RESET reset
- X_TICK_DECIMALS
- AXES2D draw
- X_TICK_LABEL
- AXES2D draw
- XY_COLUMN
- RESET reset
- XY_COLUMNS
- WORLD define
| PLOT2D draw
| SPECTRUM draw
| HIST2D draw
| HIST2D draw
| PRINT print
| GET_BARS calculate
| GET_DENSITY calculate
| PLOT_ERROR_BARS draw
| FIT non-linear
| SMOOTH_TABLE smooth
- XY_SCOLUMNS
- WRITE_TABLE write
| WORLD define
| WORLD define
| WORLD define
| HIST2D draw
| HIST2D draw
| HIST2D draw
| HIST2D draw
| TRANSFORM transform
| SMOOTH_TABLE smooth
- XY_TO_DENSITY
- XY_TO_DENSITY XY
- Y_LABEL_SHIFT
- AXES2D draw
- Y_LABEL_STYLE
- AXES2D draw
- Y_SCALE
- AXES2D draw
| CAPTION place
- Y_TICK
- AXES2D draw
- Y_TICK_DECIMALS
- AXES2D draw
- Y_TICK_LABEL
- AXES2D draw
Ben Webb
2003-10-09