Re: [modeller_usage] Fill_pdb

On 2/18/22 1:46 AM, Hocine EL KHAOUDI ENYOURY wrote: > I am trying to use the following script to fill small regions of a pdf: ... > My problem is that at the end, the input and output are the same. I > missed a step? Would you have any advice to solve my problem?

complete_pdb fills in any missing atoms in each residue (for example to add missing sidechains). It does not change the sequence. To do that, see https://salilab.org/modeller/wiki/Missing%20residues

Ben Webb, Modeller Caretaker