On 2/20/19 7:35 PM, dms305 wrote: > Thanks for getting back to me. Please find attached a zip containing > three files: the script representing a minimum reproducible example > using this PDB, the PDB itself and the modeller output from the > script. ... > I don't think this is a memory issue as Jonathan suggested - I'm not > seeing any evidence for this on my system.
Thanks! I see the problem, and it's fixed now - will be in the next release. Jonathan was sort of right, in that due to the large size of the model here, you hit a memory limit - but this is an internal Modeller limit (the stack size), not the total memory on your machine. (The offending arrays are now dynamically allocated to avoid exhausting the stack.)
As a workaround for now, you can run this calculation on a Linux or Mac machine - only Windows is affected in this instance.
Ben Webb, Modeller Caretaker