Hello Ben thank you for your kind update:).
On Tue, Aug 30, 2022 at 5:45 AM Modeller Caretaker < modeller-care@salilab.org> wrote:
> On 8/27/22 12:03 PM, Joel Subach via modeller_usage wrote: > > I am trying to model missing residues for a heptamer via the below > > Modeller link, is Modeller able to model these 12-missing residues in > > each of the seven exterior cytoplasmic loop-regions via a properly > > formatted alignment.ali file or would modeling just the missing residues > > for a single monomer work best for Modeller? > > Modeller can remodel all chains simultaneously. It may be more efficient > to remodel just the monomer though, particularly if you are working with > a homoheptamer and the missing loops don't interact with each other. > > Ben Webb, Modeller Caretaker > -- > modeller-care@salilab.org https://salilab.org/modeller/ > Modeller mail list: https://salilab.org/mailman/listinfo/modeller_usage >