Re: [modeller_usage] How to make better conformational sampling of models using MODELLER?

On 01/25/2018 12:54 PM, Mahesh VELUSAMY wrote: > On 25-01-2018 20:59, Modeller Caretaker wrote: >> Sure, by weakening any homology-derived restraints. Either adjust the >> weights, > May I know how to do these both weakening homology-derived restraints > and adjusting the weights (also let me know what do you mean by weights? > It would be helpful if you give any examples or sources to read)

Adjust schedule_scale, as per https://salilab.org/modeller/9.19/manual/node19.html

Ben Webb, Modeller Caretaker