Re: [modeller_usage] energy of interface between selections

On 10/31/16 7:23 AM, David De Sancho wrote: > However, I found out that for using > energy more tricky bits seem to be required, starting by an alignment > between two sequences.

Just use the complete_pdb script, which assigns CHARMM atom types so that the energy can be calculated. See https://salilab.org/modeller/9.17/manual/node455.html

Ben Webb, Modeller Caretaker