---------- Forwarded message --------- De: Victor Eduardo Rojas Pérez victor.rojas.03@alu.ucm.cl Date: mar, 3 sept 2024 a las 13:11 Subject: Error in modeller 10.5 To: Modeller Caretaker modeller-care@salilab.org, < modeller_usage@salilab.org>
Dear All,
Along with greeting them cordially. I have the following error using modeller 10.5. in linux operating system. I have added the restyp RTN, retinal with % symbol in the restyp.lib file in the modlib folder but I still have this error. What else could I do to solve this error.
Thank you.
mod10.5 align1.py Could not find platform independent libraries <prefix> Could not find platform dependent libraries <exec_prefix> Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>] 'import site' failed; use -v for traceback Traceback (most recent call last): File "align1.py", line 56, in ? a.make() # do homology modeling File "/usr/lib/modeller10.5/modlib/modeller/automodel/automodel.py", line 141, in make self.homcsr(exit_stage) File "/usr/lib/modeller10.5/modlib/modeller/automodel/automodel.py", line 611, in homcsr aln = self.read_alignment() File "/usr/lib/modeller10.5/modlib/modeller/automodel/automodel.py", line 572, in read_alignment aln.append(file=self.alnfile, align_codes=codes) File "/usr/lib/modeller10.5/modlib/modeller/alignment.py", line 82, in append allow_alternates) _modeller.ModellerError: read_al_375E> Unknown residue type,position,sequence: % 334 1