So how to I pick the "best" model from these multiple models. I assume these multiple models are produced from the differential order of my templates. On Tue, Sep 24, 2013 at 5:16 PM, Modeller Caretaker < modeller-care@salilab.org> wrote:
> On 09/24/2013 02:14 PM, HIDDEN wrote: > >> These different restraints due to the order of my templates do seem to >> affect my side chain modelling. >> > > Right, that's what I said. > > > When I switch the order of my >> templates in salign.py, and do the whole procedure again, I get a model >> where the side chains are positioned differenty >> > > Yes, this will happen. I'm not sure what you want me to say other than to > simply repeat myself: you need to build multiple models. > > > Ben Webb, Modeller Caretaker > -- > modeller-care@salilab.org http://www.salilab.org/**modeller/http://www.salilab.org/modeller/ > Modeller mail list: https://salilab.org/mailman/**listinfo/modeller_usagehttps://salilab.org/mailman/listinfo/modeller_usage >