Making a heterotetramer model, while one of the chain is built by using two template
Dear Modeller users
As the Subject said, I want to make a heterotetramer model, and make one of the chains by using two template. I know how to make heterotetramer model or build a single chain with multitemplate. The problem is that I don't know how to combine these two in my case.
Thank you in advance
Best Zhucheng
On 11/3/23 1:45 AM, rpw641--- via modeller_usage wrote: > As the Subject said, I want to make a heterotetramer model, and make > one of the chains by using two template. I know how to make > heterotetramer model or build a single chain with multitemplate. The > problem is that I don't know how to combine these two in my case.
This wouldn't be substantially different from the single chain case - you would just need to align each template with the right part of the model sequence. If you have a 4-chain template and you want to use a second template for part of one chain, your alignment would look something like
temp1 AAAA/BBBB/CCCC/DDDD* temp2 ----/----/CCCC/----* model AAAA/BBBB/CCCC/DDDD*
Ben Webb, Modeller Caretaker
participants (2)
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Modeller Caretaker
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rpw641@sund.ku.dk