On 3/13/21 9:12 AM, anuricha sharma wrote: > Hello sir, I have a query regarding the alignment, that how can I align > my two pdb structures and one query sequence(xyz.ali) together using > basic modelling, I am unable to to do alignment using two models and one > query sequence in basic modelling as it aligns only one model and one > query sequence, can you suggest any changes that I need to do in my > align2d.py file.

We would first need to see your Python script and alignment file in order to be able to suggest any changes.

Ben Webb, Modeller Caretaker