Mattias de Hollander wrote: > How do i make a plot of the DOPE score like the one in the 'basic > tutorial'. It says 'This profile is written to a file `TvLDH.profile', > which can be used as input to a graphing program such as GNUPLOT', but > when a plot it i get a straight line. > Also, when i use the evaluate_model.py script on my own sequences, i > only get a profile file and no dat files.

The .dat file is simply the last column from the profile file. It is trivial to produce this with Unix utilities (e.g. awk, perl) or with a spreadsheet application.

Ben Webb, Modeller Caretaker