i would like to implement simulated anealing protocol in optimize.py script.along with default optimization

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Today's Topics:

1. Re: DOPE (Modeller Caretaker) 2. regarding DOPE score (vidhya sankar) 3. regrding superpose.py (vidhya sankar) 4. ref: SUPERPOSE.PY (vidhya sankar) 5. Re: regarding DOPE score (Modeller Caretaker)

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Message: 1 Date: Thu, 09 Aug 2007 12:57:42 -0700 From: Modeller Caretaker Subject: Re: [modeller_usage] DOPE To: Ester Fust? Dom?nguez Cc: modeller_usage@salilab.org Message-ID: 46BB71B6.8070207@salilab.org Content-Type: text/plain; charset=ISO-8859-1; format=flowed

Ester Fust? Dom?nguez wrote: > How can I see the DOPE score profile? I don't know how to use > *assess_dope* command.

There is an example at the end of the basic tutorial at http://salilab.org/modeller/tutorial/basic.html

Ben Webb, Modeller Caretaker