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modpipe-users@salilab.org

March 2016

2 participants
2 discussions

Re: [ModPipe-users] ModPipe-users Digest, Vol 8, Issue 1
by jb ZHOU 09 Mar '16

09 Mar '16

Hello Ben, Thank you very much for you help,I changed `pwd` to "pwd" before, Sincerely, Zhoujb 2016-03-10 4:00 GMT+08:00 <modpipe-users-request(a)salilab.org>: > Send ModPipe-users mailing list submissions to > modpipe-users(a)salilab.org > > To subscribe or unsubscribe via the World Wide Web, visit > https://salilab.org/mailman/listinfo/modpipe-users > or, via email, send a message with subject or body 'help' to > modpipe-users-request(a)salilab.org > > You can reach the person managing the list at > modpipe-users-owner(a)salilab.org > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of ModPipe-users digest..." > > > Today's Topics: > > 1. Modpipe problem (jb ZHOU) > 2. Re: Modpipe problem (Ben Webb) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Wed, 9 Mar 2016 09:42:10 +0800 > From: jb ZHOU <zhoujb0920(a)gmail.com> > To: modpipe-users(a)salilab.org > Subject: [ModPipe-users] Modpipe problem > Message-ID: > < > CACTggG+RgtqZPqb0-vvJLXxpDTw08AuGZYMzh0GB8CVVoes5qw(a)mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > Dear ModPipe community: > I installed modpipe in our system,but when I run the example of modpipe,I > get the following error,I don't know how to deal with it: > > $ ../main/ModPipe.pl --conf_file modpipe.conf --sequence_id > 97e075794f588a59e8a0fb8a945814b1MLGIKIKP > MPLib::MPModules::GetProfile__E> Sequence file not found: > > pwd/data/97e/97e075794f588a59e8a0fb8a945814b1MLGIKIKP/sequence/97e075794f588a59e8a0fb8a945814b1MLGIKIKP.fsa > ModPipe.pl__E> Failed to calculate BUILD_PROFILE profile > ModPipe.pl__E> Sequence: 97e075794f588a59e8a0fb8a945814b1MLGIKIKP > > Thanks for your help, > Zhoujb >

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Modpipe problem
by jb ZHOU 08 Mar '16

08 Mar '16

Dear ModPipe community: I installed modpipe in our system,but when I run the example of modpipe,I get the following error,I don't know how to deal with it: $ ../main/ModPipe.pl --conf_file modpipe.conf --sequence_id 97e075794f588a59e8a0fb8a945814b1MLGIKIKP MPLib::MPModules::GetProfile__E> Sequence file not found: pwd/data/97e/97e075794f588a59e8a0fb8a945814b1MLGIKIKP/sequence/97e075794f588a59e8a0fb8a945814b1MLGIKIKP.fsa ModPipe.pl__E> Failed to calculate BUILD_PROFILE profile ModPipe.pl__E> Sequence: 97e075794f588a59e8a0fb8a945814b1MLGIKIKP Thanks for your help, Zhoujb

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