next up previous contents index
Next: dope_loopmodel() prepare Up: Comparative modeling class reference Previous: loopmodel.build_ini_loop() create   Contents   Index


dope_loopmodel reference

The dope_loopmodel class is derived from loopmodel, and is very similar in operation, except that a newer DOPE-based loop modeling protocol is used (see selection.assess_dope()). The main differences are:

To use, simply use 'dope_loopmodel' rather than 'loopmodel' in your Python scripts (see Section 2.3 for examples). Note that it will be significantly slower than the regular loop modeling procedure, primarily due to the GB/SA interaction.



Subsections

Ben Webb 2007-01-19